SubtiBank SubtiBank
ytxG [2019-07-09 09:49:44]
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

ytxG [2019-07-09 09:49:44]

general stress protein
locus
BSU29780
pI
9.98
mw
15.60 kDa
protein length
140 aa Sequence Blast
gene length
423 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
csb40
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.1|General stress proteins (controlled by SigB)]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    3,047,593 3,048,015

    Phenotypes of a mutant

  • inactivation of ''[gene|00A42FDB559BE2647CD682180420A435E2E7035F|ytxG]'' reduces sporulation efficiency to 39.6% that of wild type cells; aberrant membrane morphologies [Pubmed|26735940]

    • The protein

    Protein family

  • UPF0478 family (according to Swiss-Prot)

    • [SW|Localization]

  • membrane (according to UniProt)

    • Expression and Regulation

    Operons

    genes
    [gene|00A42FDB559BE2647CD682180420A435E2E7035F|ytxG]-[gene|43BF293F735ED783D36F33AA4701D57F2AED6657|ytxH]-[gene|8B4E1D087B75B5E77BCB60FF3465270CEB72B028|ytxJ]
    description
    [Pubmed|8733232]

    sigma factors

  • [protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB]: sigma factor, [Pubmed|8733232,11544224], in [regulon|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB regulon]
  • [protein|DC3449D5F195E5C2E9E14FEC95396C8F1FDF73B4|SigH]: sigma factor, [Pubmed|8733232], in [regulon|DC3449D5F195E5C2E9E14FEC95396C8F1FDF73B4|SigH regulon]

    • regulation

  • induced by stress ([protein|search|SigB]) [Pubmed|8733232,11544224]
    • view in new tab

    Biological materials

    Mutant

  • MGNA-B529 (ytxG::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1528 NBRP B. subtilis, Japan]
  • BKE29780 ([gene|00A42FDB559BE2647CD682180420A435E2E7035F|ytxG]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE29780 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCTCAAACCTCCTTGCTG, downstream forward: _UP4_TAAGAGAAAAAAATACTAAG
  • BKK29780 ([gene|00A42FDB559BE2647CD682180420A435E2E7035F|ytxG]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK29780 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCTCAAACCTCCTTGCTG, downstream forward: _UP4_TAAGAGAAAAAAATACTAAG

    • References

  • 11544224,8733232,18763711,26735940